STRINGSTRING
Solyc11g008700.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g008700.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g008700.1.1Uncharacterized protein (508 aa)    
Predicted Functional Partners:
Solyc10g081290.1.1
Uncharacterized protein (207 aa)
     
 
  0.938
Solyc10g081090.1.1
Uncharacterized protein (127 aa)
     
 
  0.938
Solyc10g081070.1.1
Uncharacterized protein (684 aa)
     
 
  0.938
Solyc07g041790.1.1
Uncharacterized protein (73 aa)
     
 
  0.938
Solyc09g008470.2.1
Uncharacterized protein (345 aa)
       
 
  0.929
Solyc12g056080.1.1
Uncharacterized protein (693 aa)
     
 
  0.880
Solyc10g050500.1.1
Uncharacterized protein (69 aa)
     
 
  0.880
Solyc03g007850.1.1
Uncharacterized protein (673 aa)
     
 
  0.880
CRNKL1
Crooked neck-like protein 1 (664 aa)
     
 
  0.880
Solyc03g083430.2.1
Uncharacterized protein (509 aa)
     
 
  0.774
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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