STRINGSTRING
Solyc11g008890.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g008890.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g008890.1.1Uncharacterized protein (291 aa)    
Predicted Functional Partners:
Solyc07g006780.2.1
Uncharacterized protein (621 aa)
           
  0.544
Solyc11g005600.1.1
Uncharacterized protein (412 aa)
           
  0.542
Solyc09g090400.2.1
Uncharacterized protein (385 aa)
           
  0.499
Solyc09g065650.2.1
Uncharacterized protein (934 aa)
           
  0.491
Solyc11g017420.1.1
Uncharacterized protein (713 aa)
           
  0.443
Solyc05g007430.2.1
Uncharacterized protein (513 aa)
           
  0.443
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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