STRINGSTRING
Solyc11g008990.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g008990.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g008990.1.1Uncharacterized protein (330 aa)    
Predicted Functional Partners:
Solyc05g010670.2.1
Uncharacterized protein (787 aa)
     
 
  0.693
Solyc10g079600.1.1
Uncharacterized protein (227 aa)
       
      0.570
Solyc02g071220.2.1
Uncharacterized protein (166 aa)
       
      0.570
Solyc07g054820.2.1
Uncharacterized protein (250 aa)
   
   
  0.531
Solyc02g087230.2.1
Uncharacterized protein (149 aa)
   
   
  0.530
Solyc11g070150.1.1
Uncharacterized protein (137 aa)
       
      0.487
Solyc08g066350.1.1
Uncharacterized protein (136 aa)
       
      0.487
Solyc06g084410.2.1
Uncharacterized protein (120 aa)
       
      0.487
Solyc03g116720.1.1
Uncharacterized protein (115 aa)
       
      0.487
Solyc01g098400.2.1
Uncharacterized protein (148 aa)
       
      0.487
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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