STRINGSTRING
Solyc11g010150.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g010150.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g010150.1.1Uncharacterized protein (83 aa)    
Predicted Functional Partners:
Solyc03g118070.2.1
Uncharacterized protein (466 aa)
     
  0.980
Solyc01g099280.2.1
Uncharacterized protein (483 aa)
     
  0.980
Solyc01g067590.2.1
Uncharacterized protein (482 aa)
     
  0.980
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
  0.979
Solyc05g052980.2.1
Uncharacterized protein (409 aa)
   
  0.930
Solyc03g006960.2.1
Uncharacterized protein (376 aa)
   
  0.930
Solyc12g062250.1.1
Uncharacterized protein (573 aa)
     
  0.866
ptpkis1
Protein tyrosine phosphatase (370 aa)
     
  0.866
Solyc03g111160.2.1
Uncharacterized protein (372 aa)
     
  0.866
Solyc05g018300.2.1
Uncharacterized protein (1080 aa)
     
  0.862
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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