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Solyc11g010560.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g010560.1.1" - TH65-like protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g010560.1.1TH65-like protein ; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1318 aa)    
Predicted Functional Partners:
101263666
ARM repeat superfamily protein (2023 aa)
     
 
  0.759
101260712
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (474 aa)
     
 
  0.752
101262861
annotation not available (937 aa)
     
 
  0.723
101263672
annotation not available (769 aa)
     
 
  0.723
Solyc10g006330.2.1
Uncharacterized protein; Plastid movement impaired1 (883 aa)
     
   
  0.708
101256302
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (737 aa)
     
        0.695
101243636
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (718 aa)
     
        0.655
101251157
Uncharacterized protein; STT7 homolog STN7 (555 aa)
     
 
  0.642
101265455
ATP binding;protein kinases;protein serine/threonine kinases (529 aa)
     
 
  0.632
Solyc06g051040.2.1
Uncharacterized protein; Mad3/BUB1 homology region 1 (588 aa)
     
 
  0.632
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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