STRINGSTRING
SGT1 protein (Solanum lycopersicum) - STRING interaction network
"SGT1" - Suppressor-like protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGT1Suppressor-like protein (645 aa)    
Predicted Functional Partners:
Solyc02g091330.2.1
Uncharacterized protein (286 aa)
     
      0.923
Solyc07g008880.2.1
Uncharacterized protein (2384 aa)
     
      0.900
Solyc06g043160.1.1
Uncharacterized protein (52 aa)
     
      0.900
Solyc01g008260.2.1
Uncharacterized protein (164 aa)
       
      0.720
SKP1
S-phase kinase-associated protein 1 (EC-3.1.1.3) (156 aa)
           
  0.697
LRP
LRR protein (221 aa)
           
  0.690
Solyc05g009850.2.1
Uncharacterized protein (941 aa)
     
      0.689
PSMD1
26S proteasome non-ATPase regulatory subunit 1 homolog A (1004 aa)
     
      0.640
Solyc05g053650.2.1
Uncharacterized protein (993 aa)
     
      0.640
Solyc10g008180.1.1
Uncharacterized protein (731 aa)
     
      0.625
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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