STRINGSTRING
Solyc11g010900.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g010900.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g010900.1.1Uncharacterized protein (338 aa)    
Predicted Functional Partners:
Solyc03g114050.2.1
Uncharacterized protein (182 aa)
     
      0.742
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
 
  0.706
Solyc11g068830.1.1
Uncharacterized protein (477 aa)
   
   
  0.684
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
   
   
  0.610
Solyc00g050030.1.1
Annotation not available (702 aa)
   
 
  0.608
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
   
 
  0.591
Solyc08g074550.2.1
Uncharacterized protein (676 aa)
     
 
  0.568
Solyc07g064750.1.1
Uncharacterized protein (243 aa)
     
 
  0.568
Solyc07g048080.2.1
Uncharacterized protein (673 aa)
     
 
  0.568
Solyc05g005800.2.1
Uncharacterized protein (725 aa)
     
 
  0.568
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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