STRINGSTRING
Solyc11g010910.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g010910.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g010910.1.1Uncharacterized protein (380 aa)    
Predicted Functional Partners:
Solyc03g007100.2.1
Uncharacterized protein (1425 aa)
     
 
  0.810
Solyc02g083940.2.1
Uncharacterized protein (332 aa)
   
 
  0.802
Solyc12g035360.1.1
Uncharacterized protein (333 aa)
   
 
  0.795
Solyc12g014320.1.1
Uncharacterized protein (551 aa)
       
  0.776
Solyc01g007140.2.1
Uncharacterized protein (880 aa)
     
  0.748
Solyc04g056290.2.1
Uncharacterized protein (369 aa)
     
  0.743
Solyc01g105240.2.1
Uncharacterized protein (366 aa)
     
  0.743
Solyc02g091120.2.1
DNA ligase (1473 aa)
     
 
  0.731
Solyc02g088780.2.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (423 aa)
   
 
  0.698
Solyc08g023590.2.1
Uncharacterized protein (386 aa)
   
  0.697
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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