STRINGSTRING
Solyc11g010960.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g010960.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g010960.1.1Uncharacterized protein (359 aa)    
Predicted Functional Partners:
Solyc12g007030.1.1
Uncharacterized protein (500 aa)
   
 
  0.951
CCR1
Cinnamoyl-CoA reductase (332 aa)
         
  0.907
CCR2
Cinnamoyl-CoA reductase (332 aa)
         
  0.907
CTOMT1
catechol-O-methyltransferase (EC-2.1.1.6) (364 aa)
         
  0.906
Solyc06g083450.2.1
Uncharacterized protein (230 aa)
         
  0.906
Solyc06g007960.2.1
Uncharacterized protein (361 aa)
         
  0.906
Solyc03g080180.2.1
Uncharacterized protein (357 aa)
         
  0.906
Solyc03g096040.2.1
Uncharacterized protein (219 aa)
     
 
  0.904
Solyc02g084570.2.1
Uncharacterized protein (521 aa)
         
  0.902
Solyc07g052550.1.1
Peroxidase (329 aa)
         
  0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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