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STRINGSTRING
101258515 protein (Solanum lycopersicum) - STRING interaction network
"101258515" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258515annotation not available (601 aa)    
Predicted Functional Partners:
101259292
annotation not available (475 aa)
     
   
  0.745
101245021
annotation not available (475 aa)
     
   
  0.745
101246388
Uncharacterized protein; Methyltransferases;nucleic acid binding (481 aa)
           
  0.654
Solyc05g015250.2.1
annotation not available (135 aa)
     
   
  0.624
Solyc05g015220.2.1
annotation not available (749 aa)
     
   
  0.624
101245333
Protein kinase superfamily protein; Belongs to the protein kinase superfamily (817 aa)
           
  0.574
101261150
Zinc knuckle (CCHC-type) family protein (265 aa)
           
  0.574
101259874
annotation not available (205 aa)
           
  0.567
101249291
Peptidase S24/S26A/S26B/S26C family protein (168 aa)
           
  0.567
101267298
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- mitochondrion; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown func /.../UF2053, membrane (InterPro-IPR019164); Has 204 Blast hits to 204 proteins in 84 species- Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source- NCBI BLink) (230 aa)
           
  0.553
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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