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STRINGSTRING
101247487 protein (Solanum lycopersicum) - STRING interaction network
"101247487" - Thioredoxin superfamily protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101247487Thioredoxin superfamily protein; Belongs to the glutaredoxin family (144 aa)    
Predicted Functional Partners:
Solyc02g079730.2.1
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- 10 growth stages; BEST Arabidopsis thaliana protein match is- Thioredoxin superfamily pr /.../(TAIR-AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species- Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source- NCBI BLink) (365 aa)
           
  0.852
101250263
annotation not available (267 aa)
           
  0.497
101256114
annotation not available (267 aa)
           
  0.497
101265478
Uncharacterized protein; Oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor (253 aa)
   
          0.405
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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