STRINGSTRING
Solyc11g012940.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g012940.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g012940.1.1Uncharacterized protein (144 aa)    
Predicted Functional Partners:
Solyc09g083150.2.1
Uncharacterized protein (253 aa)
   
          0.515
Solyc10g006520.2.1
Uncharacterized protein (204 aa)
   
          0.506
Solyc08g082400.1.1
Uncharacterized protein (250 aa)
   
          0.505
Solyc04g080870.1.1
Uncharacterized protein (86 aa)
   
          0.502
Solyc01g111750.2.1
Uncharacterized protein (305 aa)
   
          0.476
Solyc12g099270.1.1
Uncharacterized protein (407 aa)
   
          0.472
Solyc10g085900.1.1
Uncharacterized protein (306 aa)
   
          0.463
Solyc05g014190.2.1
Uncharacterized protein (209 aa)
   
          0.463
Solyc01g109330.2.1
Uncharacterized protein (459 aa)
   
          0.463
Solyc03g098110.2.1
Uncharacterized protein (385 aa)
   
          0.461
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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