STRINGSTRING
Solyc11g012970.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g012970.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g012970.1.1Uncharacterized protein (308 aa)    
Predicted Functional Partners:
Solyc12g089210.1.1
Uncharacterized protein (379 aa)
   
 
  0.962
OTC
Ornithine carbamoyltransferase (374 aa)
   
 
  0.962
Solyc08g080370.2.1
Uncharacterized protein (460 aa)
       
  0.961
ARG2
Arginase 2 (338 aa)
     
 
  0.936
ARG1
Arginase 1 (338 aa)
     
 
  0.936
Solyc08g076990.2.1
Uncharacterized protein (438 aa)
         
  0.859
Solyc08g076980.2.1
Uncharacterized protein (428 aa)
         
  0.859
Solyc08g076970.2.1
Uncharacterized protein (391 aa)
         
  0.859
Solyc09g010420.2.1
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis- the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate (470 aa)
         
  0.834
ctd3
Aminoacylase-1 ; Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate) (448 aa)
         
 
0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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