STRINGSTRING
Solyc11g013090.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g013090.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g013090.1.1Uncharacterized protein (547 aa)    
Predicted Functional Partners:
Solyc00g030210.1.1
Annotation not available (1147 aa)
     
  0.966
Solyc00g050030.1.1
Annotation not available (702 aa)
         
  0.699
Solyc11g010850.1.1
1-deoxy-D-xylulose 5-phosphate synthase 2 (714 aa)
     
 
  0.612
Solyc08g066950.2.1
Uncharacterized protein (709 aa)
     
 
  0.612
dxs
1-D-deoxyxylulose 5-phosphate synthase (719 aa)
     
 
  0.612
Solyc08g074280.2.1
Uncharacterized protein (956 aa)
       
  0.507
Solyc12g062510.1.1
Uncharacterized protein (143 aa)
       
      0.473
Solyc12g010360.1.1
Plasma membrane ATPase (924 aa)
       
      0.473
Solyc11g072880.1.1
Uncharacterized protein (1061 aa)
       
      0.473
Solyc11g017190.1.1
Uncharacterized protein (347 aa)
       
      0.473
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: medium (51%) [HD]