STRINGSTRING
Solyc11g013200.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g013200.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g013200.1.1Uncharacterized protein (374 aa)    
Predicted Functional Partners:
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
  0.997
Solyc06g073470.2.1
Uncharacterized protein (376 aa)
       
  0.938
Solyc06g069530.2.1
Uncharacterized protein (261 aa)
   
  0.932
BCCP1
Biotin carboxylase carrier protein (285 aa)
   
  0.932
Solyc01g108030.2.1
Uncharacterized protein (570 aa)
   
  0.844
Solyc09g091410.1.1
Uncharacterized protein (165 aa)
   
  0.815
Solyc04g039830.1.1
Uncharacterized protein (208 aa)
   
  0.815
Solyc01g017200.1.1
Uncharacterized protein (113 aa)
   
  0.815
BCCP
Biotin carboxyl carrier protein of acetyl-CoA carboxylase (734 aa)
       
  0.780
Solyc01g008330.2.1
Uncharacterized protein (536 aa)
   
  0.703
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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