STRINGSTRING
Solyc11g013410.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g013410.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g013410.1.1Uncharacterized protein (94 aa)    
Predicted Functional Partners:
Solyc12g037980.1.1
Uncharacterized protein (435 aa)
     
  0.978
Solyc06g060120.2.1
Uncharacterized protein (791 aa)
     
  0.973
Solyc04g082760.2.1
Uncharacterized protein (489 aa)
     
  0.973
Solyc03g097450.2.1
Uncharacterized protein (573 aa)
     
  0.973
Solyc01g109510.2.1
Uncharacterized protein (945 aa)
     
  0.973
Solyc11g062010.1.1
Uncharacterized protein (2667 aa)
     
  0.972
Solyc01g094800.2.1
Uncharacterized protein (2236 aa)
     
  0.972
Solyc01g079700.2.1
Uncharacterized protein (151 aa)
     
  0.972
Solyc03g111250.2.1
Uncharacterized protein (526 aa)
     
  0.964
Solyc02g068100.2.1
Uncharacterized protein (544 aa)
     
  0.964
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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