• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g013820.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g013820.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g013820.1.1annotation not available (262 aa)    
Predicted Functional Partners:
101261230
annotation not available (726 aa)
     
 
  0.843
101265122
annotation not available (692 aa)
     
 
  0.843
101259736
Uncharacterized protein; Calcium-dependent lipid-binding (CaLB domain) family protein (159 aa)
           
  0.763
Solyc12g049540.1.1
annotation not available (692 aa)
     
 
  0.745
Solyc11g022380.1.1
Phosphoinositide phosphatase family protein (891 aa)
     
 
  0.745
Solyc08g044410.1.1
annotation not available (111 aa)
     
 
  0.745
Solyc08g044400.1.1
sacI homology domain-containing protein / WW domain-containing protein (1528 aa)
     
 
  0.745
101259347
annotation not available (854 aa)
     
 
  0.745
101248857
annotation not available (822 aa)
     
 
  0.745
101249357
Ribosomal L18p/L5e family protein (170 aa)
     
   
  0.741
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]