STRINGSTRING
Solyc11g013820.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g013820.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g013820.1.1Uncharacterized protein (262 aa)    
Predicted Functional Partners:
Solyc12g009250.1.1
Uncharacterized protein (210 aa)
   
 
  0.989
Cpn21
Chaperonin 21 (253 aa)
   
 
  0.989
Solyc07g008800.2.1
Uncharacterized protein (97 aa)
   
 
  0.989
Solyc05g056390.2.1
Uncharacterized protein (97 aa)
   
 
  0.989
Solyc01g088610.2.1
Uncharacterized protein (135 aa)
   
 
  0.989
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
     
 
  0.948
Solyc01g088080.2.1
Uncharacterized protein ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (541 aa)
     
  0.933
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
     
 
  0.931
Solyc12g049540.1.1
Uncharacterized protein (692 aa)
     
  0.901
Solyc11g022380.1.1
Uncharacterized protein (891 aa)
     
  0.901
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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