• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g013830.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g013830.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g013830.1.1annotation not available (1421 aa)    
Predicted Functional Partners:
101250591
Vacuolar protein sorting 34; Belongs to the PI3/PI4-kinase family (815 aa)
     
  0.964
101255550
annotation not available (850 aa)
     
 
  0.948
101255609
annotation not available (223 aa)
         
  0.925
101248349
annotation not available (1134 aa)
     
  0.859
Solyc11g043130.1.1
annotation not available (1468 aa)
     
  0.845
101261230
annotation not available (726 aa)
     
 
  0.843
101265122
annotation not available (692 aa)
     
 
  0.843
101264184
Uncharacterized protein; Calcium/lipid-binding (CaLB) phosphatase (413 aa)
     
 
  0.769
Solyc02g093000.2.1
Uncharacterized protein; PTEN 3 (453 aa)
     
 
  0.769
101255438
Uncharacterized protein; PTEN 2 (619 aa)
     
 
  0.769
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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