STRINGSTRING
Solyc11g016910.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g016910.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g016910.1.1Uncharacterized protein (93 aa)    
Predicted Functional Partners:
Solyc11g068480.1.1
Uncharacterized protein (175 aa)
     
  0.951
Solyc12g027650.1.1
Uncharacterized protein (208 aa)
     
  0.908
Solyc12g006120.1.1
Uncharacterized protein (202 aa)
     
  0.908
Solyc11g012750.1.1
Uncharacterized protein (152 aa)
     
  0.908
Solyc10g009440.2.1
Uncharacterized protein (238 aa)
     
  0.908
Solyc09g074760.1.1
Uncharacterized protein (138 aa)
     
  0.908
Solyc09g007290.2.1
Uncharacterized protein (129 aa)
     
  0.908
Solyc07g065580.1.1
Uncharacterized protein (178 aa)
     
  0.908
Solyc07g065570.1.1
Uncharacterized protein (188 aa)
     
  0.908
Solyc07g065500.1.1
Uncharacterized protein (182 aa)
     
  0.908
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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