• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g017030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g017030.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g017030.1.1annotation not available (123 aa)    
Predicted Functional Partners:
101254692
annotation not available (497 aa)
 
 
  0.825
101055537
Hop-interacting protein THI138 (771 aa)
         
  0.772
101259915
annotation not available (552 aa)
 
     
  0.692
Solyc11g013090.1.1
annotation not available (547 aa)
   
   
  0.628
Solyc00g026870.1.1
annotation not available (465 aa)
   
   
  0.621
Solyc12g008790.1.1
Uncharacterized protein; Bacterial transferase hexapeptide repeat-containing protein (269 aa)
   
 
  0.602
Solyc03g031560.2.1
annotation not available (318 aa)
   
   
  0.598
Solyc02g063180.2.1
annotation not available (141 aa)
   
   
  0.583
101267455
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
         
  0.581
101246955
Diaminopimelate epimerase family protein (363 aa)
         
  0.581
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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