STRINGSTRING
Solyc11g017030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g017030.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g017030.1.1Uncharacterized protein (123 aa)    
Predicted Functional Partners:
Solyc00g030210.1.1
Annotation not available (1147 aa)
     
 
  0.748
Solyc03g007970.1.1
Uncharacterized protein (552 aa)
 
   
  0.741
Solyc00g042130.1.1
Annotation not available (704 aa)
   
   
  0.714
Solyc00g042140.1.1
Annotation not available (399 aa)
   
   
  0.702
Solyc12g062630.1.1
Uncharacterized protein (134 aa)
   
   
  0.656
Solyc02g063180.2.1
Uncharacterized protein (141 aa)
       
  0.631
Solyc02g070560.2.1
Uncharacterized protein (518 aa)
 
     
  0.587
Solyc05g012800.1.1
Uncharacterized protein (497 aa)
 
   
  0.587
Solyc10g085400.1.1
Uncharacterized protein (317 aa)
       
  0.551
Solyc10g085390.1.1
Uncharacterized protein (588 aa)
       
  0.551
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (18%) [HD]