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LOC543616 protein (Solanum lycopersicum) - STRING interaction network
"LOC543616" - CSN5 protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543616CSN5 protein (367 aa)    
Predicted Functional Partners:
Solyc04g080160.2.1
Uncharacterized protein (397 aa)
     
  0.990
Solyc10g005660.2.1
Uncharacterized protein (313 aa)
     
  0.988
Solyc02g093920.2.1
Uncharacterized protein (428 aa)
     
  0.986
Solyc01g091650.2.1
Uncharacterized protein (440 aa)
     
  0.985
Solyc01g090290.2.1
Uncharacterized protein (259 aa)
     
  0.985
Solyc11g062430.1.1
Uncharacterized protein (439 aa)
     
  0.979
Solyc10g081150.1.1
Uncharacterized protein (439 aa)
     
  0.979
Solyc01g008840.2.1
Uncharacterized protein (439 aa)
     
  0.979
Solyc01g104600.2.1
Uncharacterized protein (197 aa)
     
  0.974
Solyc02g070460.2.1
Uncharacterized protein (802 aa)
       
  0.973
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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