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Solyc11g018600.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g018600.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g018600.1.1Uncharacterized protein; TAPETUM 1 (256 aa)    
Predicted Functional Partners:
Ms10(35)
Uncharacterized protein; Basic helix-loop-helix (bHLH) DNA-binding superfamily protein (209 aa)
           
  0.847
SSADH
Succinic semialdehyde dehydrogenase ; Belongs to the aldehyde dehydrogenase family (522 aa)
     
 
  0.770
Solyc04g008420.1.1
RING/FYVE/PHD zinc finger superfamily protein (678 aa)
     
   
  0.751
Solyc09g064440.2.1
Multidrug resistance-associated protein 5 (1531 aa)
           
  0.736
RTEL1
RAD3-like DNA-binding helicase protein (1040 aa)
       
 
  0.728
101255286
Myb domain protein 26 (365 aa)
     
   
  0.723
101265072
Uncharacterized protein; Cytochrome P450, family 703, subfamily A, polypeptide 2 (556 aa)
     
 
  0.722
Solyc01g010900.2.1
Uncharacterized protein; Cytochrome P450, family 704, subfamily B, polypeptide 1 (538 aa)
     
 
  0.721
Solyc03g121790.2.1
Unknown protein; LOCATED IN- endomembrane system; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G10310.1) (120 aa)
           
  0.691
101262822
Aldehyde dehydrogenase 3H1; Belongs to the aldehyde dehydrogenase family (474 aa)
     
 
  0.683
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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