STRINGSTRING
Solyc11g028090.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g028090.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g028090.1.1Uncharacterized protein (202 aa)    
Predicted Functional Partners:
Solyc11g072190.1.1
Uncharacterized protein (227 aa)
     
  0.976
DDTFR10
Ripening regulated protein DDTFR10 (241 aa)
     
  0.976
Solyc01g098000.2.1
Uncharacterized protein (241 aa)
     
  0.976
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
     
  0.946
Solyc11g069700.1.1
Elongation factor 1-alpha ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (447 aa)
     
  0.848
LOC544055
Elongation factor 1-alpha ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (448 aa)
     
  0.848
Solyc06g009960.1.1
Uncharacterized protein (410 aa)
     
  0.848
Solyc06g005060.2.1
Elongation factor 1-alpha (448 aa)
     
  0.848
Solyc01g102410.2.1
Uncharacterized protein (740 aa)
     
  0.845
Solyc11g028100.1.1
Uncharacterized protein (414 aa)
       
0.747
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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