STRINGSTRING
MET protein (Solanum lycopersicum) - STRING interaction network
"MET" - Cytosine-specific methyltransferase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
METCytosine-specific methyltransferase (1559 aa)    
Predicted Functional Partners:
Solyc12g096990.1.1
Uncharacterized protein (665 aa)
   
  0.935
Solyc10g077070.1.1
Uncharacterized protein (714 aa)
   
  0.935
Solyc09g090810.1.1
Uncharacterized protein (696 aa)
   
  0.935
Solyc08g077940.1.1
Uncharacterized protein (1037 aa)
   
  0.935
Solyc06g060960.1.1
Uncharacterized protein (1055 aa)
   
  0.935
Solyc03g093760.1.1
Uncharacterized protein (797 aa)
   
  0.935
Solyc03g093700.1.1
Uncharacterized protein (839 aa)
   
  0.935
Solyc02g094520.2.1
Uncharacterized protein (677 aa)
   
  0.935
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
   
 
  0.920
SAM2
S-adenosylmethionine synthase 2 ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (By similarity) (393 aa)
       
  0.908
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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