• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g032010.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g032010.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g032010.1.1annotation not available (202 aa)    
Predicted Functional Partners:
101261454
annotation not available (1124 aa)
     
 
  0.988
101253501
annotation not available (1069 aa)
     
 
  0.965
Solyc05g055690.1.1
annotation not available (1091 aa)
     
 
  0.965
101261093
Sec23/sec24 transport family protein (742 aa)
     
 
  0.963
Solyc02g082220.2.1
Sec23/Sec24 protein transport family protein (1030 aa)
     
 
  0.963
101259292
annotation not available (475 aa)
     
   
  0.871
101245021
annotation not available (475 aa)
     
   
  0.871
101257847
annotation not available (301 aa)
     
 
  0.862
101265789
annotation not available (302 aa)
     
 
  0.862
Solyc10g081920.1.1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (911 aa)
     
   
  0.857
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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