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STRINGSTRING
101258326 protein (Solanum lycopersicum) - STRING interaction network
"101258326" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258326annotation not available (177 aa)    
Predicted Functional Partners:
101255621
Hydroxyproline-rich glycoprotein family protein (345 aa)
     
 
  0.987
Solyc07g007210.2.1
annotation not available (925 aa)
     
 
  0.956
101247104
annotation not available (110 aa)
     
 
  0.955
101261183
Uncharacterized protein; Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (1393 aa)
     
 
  0.944
Solyc04g010260.2.1
annotation not available (1175 aa)
     
 
  0.944
Solyc03g006520.2.1
annotation not available (591 aa)
     
 
  0.944
101264481
annotation not available (586 aa)
     
 
  0.944
101247946
annotation not available (87 aa)
     
 
  0.939
101244858
annotation not available (87 aa)
     
 
  0.939
101248760
U2 small nuclear ribonucleoprotein A (286 aa)
     
 
  0.939
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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