STRINGSTRING
Solyc11g039950.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g039950.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g039950.1.1Uncharacterized protein (177 aa)    
Predicted Functional Partners:
Solyc09g008470.2.1
Uncharacterized protein (345 aa)
     
  0.978
Solyc10g080630.1.1
Uncharacterized protein (1393 aa)
     
  0.975
Solyc04g010260.2.1
Uncharacterized protein (1175 aa)
     
  0.975
Solyc03g006520.2.1
Uncharacterized protein (591 aa)
     
  0.974
Solyc02g078610.2.1
Uncharacterized protein (586 aa)
     
  0.974
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
  0.974
Solyc03g083430.2.1
Uncharacterized protein (509 aa)
     
  0.973
Solyc10g081290.1.1
Uncharacterized protein (207 aa)
     
  0.972
Solyc10g081090.1.1
Uncharacterized protein (127 aa)
     
  0.972
Solyc10g081070.1.1
Uncharacterized protein (684 aa)
     
  0.972
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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