STRINGSTRING
Solyc11g040050.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g040050.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g040050.1.1Uncharacterized protein (389 aa)    
Predicted Functional Partners:
Solyc04g078050.2.1
Uncharacterized protein (934 aa)
       
      0.946
Solyc09g009680.2.1
Uncharacterized protein (566 aa)
       
      0.902
Solyc06g062900.2.1
Uncharacterized protein (240 aa)
       
      0.902
Solyc03g122020.2.1
Uncharacterized protein (642 aa)
       
      0.902
Solyc01g007120.2.1
Uncharacterized protein (457 aa)
       
      0.618
Solyc11g005110.1.1
Uncharacterized protein (523 aa)
     
 
    0.546
Solyc12g098160.1.1
Uncharacterized protein (1140 aa)
           
  0.489
Solyc01g067560.2.1
Uncharacterized protein (1209 aa)
           
  0.489
Solyc10g085970.1.1
Uncharacterized protein (198 aa)
           
  0.480
Solyc09g007090.2.1
Uncharacterized protein (200 aa)
           
  0.480
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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