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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g040380.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g040380.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g040380.1.1annotation not available (115 aa)    
Predicted Functional Partners:
101248664
annotation not available (377 aa)
 
   
  0.966
101244777
annotation not available (522 aa)
   
   
  0.939
101260521
annotation not available (519 aa)
   
   
  0.939
101258399
annotation not available (565 aa)
 
   
  0.771
LOC543920
Cystathionine gamma synthase (540 aa)
   
   
  0.727
101258686
Semialdehyde dehydrogenase family protein (381 aa)
   
   
  0.717
101243855
Histidinol dehydrogenase, chloroplastic; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (438 aa)
   
   
  0.710
PRO2
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (720 aa)
   
   
  0.704
101244293
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family (717 aa)
   
   
  0.704
101254553
annotation not available (432 aa)
   
   
  0.678
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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