STRINGSTRING
Solyc11g042640.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g042640.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g042640.1.1Uncharacterized protein (276 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
 
  0.857
Solyc06g060310.2.1
Uncharacterized protein (535 aa)
 
  0.841
Solyc11g012850.1.1
Uncharacterized protein (535 aa)
 
  0.840
LOC543677
Lethal leaf spot 1-like protein (537 aa)
 
  0.837
Solyc04g040160.2.1
Uncharacterized protein (544 aa)
 
  0.834
Solyc04g039870.1.1
Uncharacterized protein (134 aa)
 
  0.819
Solyc12g096550.1.1
Uncharacterized protein (546 aa)
 
  0.819
Solyc07g008310.2.1
Uncharacterized protein (412 aa)
   
  0.777
Solyc07g008300.1.1
Uncharacterized protein (410 aa)
   
  0.777
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
     
 
  0.747
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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