• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g042710.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g042710.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g042710.1.1annotation not available (158 aa)    
Predicted Functional Partners:
101255345
ARF GAP-like zinc finger-containing protein ZIGA4 (741 aa)
       
 
  0.623
101261389
Uncharacterized protein; Copper ion binding (114 aa)
           
  0.623
Solyc04g071960.2.1
annotation not available (300 aa)
       
 
  0.578
101254297
annotation not available (275 aa)
       
 
  0.578
101253307
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (228 aa)
           
  0.558
101267791
annotation not available (690 aa)
           
  0.550
Solyc06g065920.2.1
Protein phosphatase 2C family protein (374 aa)
       
 
  0.522
101246217
NSP (nuclear shuttle protein)-interacting GTPase (691 aa)
       
 
  0.438
Solyc08g067930.2.1
Uncharacterized protein; ArfGap/RecO-like zinc finger domain-containing protein (643 aa)
       
 
  0.438
101259917
annotation not available (186 aa)
           
  0.432
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (6%) [HD]