STRINGSTRING
Solyc11g043010.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g043010.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g043010.1.1Uncharacterized protein (728 aa)    
Predicted Functional Partners:
Solyc09g031780.2.1
Uncharacterized protein (1005 aa)
       
 
  0.709
Solyc06g076360.2.1
Uncharacterized protein (812 aa)
       
 
  0.678
Solyc06g084360.2.1
Uncharacterized protein (381 aa)
       
      0.465
Solyc09g075830.2.1
Uncharacterized protein (1675 aa)
           
  0.447
Solyc11g062070.1.1
Uncharacterized protein (698 aa)
       
 
  0.419
Solyc10g079290.1.1
Uncharacterized protein (702 aa)
       
 
  0.419
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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