STRINGSTRING
Solyc11g044340.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g044340.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g044340.1.1Uncharacterized protein (784 aa)    
Predicted Functional Partners:
Solyc09g098390.2.1
Uncharacterized protein (355 aa)
     
  0.975
Solyc02g085420.2.1
Uncharacterized protein (478 aa)
     
  0.975
cdc5
CDC5-like protein (987 aa)
     
  0.974
Solyc05g005620.2.1
Uncharacterized protein (958 aa)
     
 
  0.965
Solyc11g008470.1.1
Uncharacterized protein (499 aa)
     
  0.957
Solyc11g008460.1.1
Uncharacterized protein (404 aa)
     
  0.957
Solyc01g099380.2.1
Uncharacterized protein (266 aa)
     
  0.957
Solyc05g056280.2.1
Uncharacterized protein (400 aa)
     
 
  0.939
Solyc03g093160.2.1
Uncharacterized protein (355 aa)
     
 
  0.939
Solyc05g052000.2.1
Uncharacterized protein (219 aa)
     
  0.897
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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