STRINGSTRING
Solyc11g044810.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g044810.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g044810.1.1Uncharacterized protein (250 aa)    
Predicted Functional Partners:
Solyc08g062370.2.1
Uncharacterized protein (178 aa)
   
          0.507
Solyc02g062500.2.1
Uncharacterized protein (321 aa)
   
          0.498
Solyc02g068330.1.1
Uncharacterized protein (257 aa)
   
          0.497
Solyc09g089710.2.1
Uncharacterized protein (133 aa)
   
          0.495
Solyc02g068310.2.1
Uncharacterized protein (301 aa)
   
          0.495
Solyc01g090610.2.1
Uncharacterized protein (315 aa)
   
          0.495
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.489
Solyc06g066840.2.1
Uncharacterized protein (314 aa)
   
          0.488
Solyc06g067870.2.1
Uncharacterized protein (317 aa)
   
          0.480
Solyc01g006610.1.1
Uncharacterized protein (316 aa)
   
          0.479
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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