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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g044830.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g044830.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g044830.1.1annotation not available (112 aa)    
Predicted Functional Partners:
101257313
Chalcone and stilbene synthase family protein; Belongs to the chalcone/stilbene synthases family (383 aa)
       
 
  0.577
Solyc04g071740.1.1
annotation not available (126 aa)
       
 
  0.517
LOC544150
Dihydroflavonol 4-reductase; Bifunctional enzyme involved in flavonoid metabolism (379 aa)
       
 
  0.517
Solyc01g090600.2.1
annotation not available (358 aa)
       
 
  0.469
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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