STRINGSTRING
Solyc11g044870.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g044870.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g044870.1.1Uncharacterized protein (461 aa)    
Predicted Functional Partners:
Solyc11g005700.1.1
Uncharacterized protein (420 aa)
       
      0.513
Solyc04g071030.1.1
Uncharacterized protein (427 aa)
       
      0.513
Solyc06g010100.1.1
Uncharacterized protein (855 aa)
     
 
  0.485
Solyc11g069160.1.1
Uncharacterized protein (877 aa)
     
 
  0.472
Solyc08g008130.2.1
Uncharacterized protein (883 aa)
     
 
  0.472
Solyc06g010000.2.1
Uncharacterized protein (856 aa)
     
 
  0.472
Solyc01g095130.2.1
Uncharacterized protein (311 aa)
     
 
  0.472
Solyc01g057900.2.1
Uncharacterized protein (1030 aa)
     
   
  0.416
UBC
Ubiquitin conjugating enzyme E2 (148 aa)
       
 
  0.416
Solyc11g071260.1.1
Uncharacterized protein (157 aa)
       
 
  0.416
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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