• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101253450 protein (Solanum lycopersicum) - STRING interaction network
"101253450" - ARM repeat superfamily protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101253450ARM repeat superfamily protein (461 aa)    
Predicted Functional Partners:
101260498
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (219 aa)
           
  0.763
101261294
Auxin transport protein (BIG) (5104 aa)
           
  0.700
101243947
annotation not available (420 aa)
     
      0.699
101261019
annotation not available (427 aa)
     
      0.699
Solyc01g080920.2.1
annotation not available (409 aa)
     
      0.699
101260419
Uncharacterized protein; Galactose oxidase/kelch repeat superfamily protein (676 aa)
     
   
  0.693
101246276
Transducin family protein / WD-40 repeat family protein (1382 aa)
     
   
  0.667
101268437
annotation not available (196 aa)
           
  0.612
Solyc03g094090.2.1
annotation not available (105 aa)
           
  0.612
Solyc03g094080.2.1
annotation not available (159 aa)
           
  0.612
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]