STRINGSTRING
Solyc11g044990.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g044990.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g044990.1.1Uncharacterized protein (119 aa)    
Predicted Functional Partners:
Solyc03g095840.2.1
Uncharacterized protein (344 aa)
     
  0.967
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
   
  0.868
Solyc01g103750.2.1
Uncharacterized protein (394 aa)
   
 
  0.793
Solyc04g050520.2.1
Uncharacterized protein (1340 aa)
     
 
  0.792
Solyc04g050510.2.1
Uncharacterized protein (1314 aa)
     
 
  0.792
Solyc07g064810.2.1
Uncharacterized protein (588 aa)
   
   
  0.738
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
   
   
  0.708
Solyc12g049580.1.1
Uncharacterized protein (409 aa)
     
 
  0.692
Solyc01g098180.2.1
Uncharacterized protein (732 aa)
   
 
  0.675
Solyc08g081150.2.1
Uncharacterized protein (536 aa)
   
   
  0.672
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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