• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g045010.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g045010.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g045010.1.1annotation not available (91 aa)    
Predicted Functional Partners:
101257451
annotation not available (344 aa)
     
 
  0.929
101267619
Uncharacterized protein; 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain (386 aa)
     
      0.738
Solyc01g008310.2.1
tRNA synthetase beta subunit family protein (576 aa)
   
   
  0.734
Solyc08g014060.2.1
Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl-tRNAi to 40S ribosomal subunits. In contrast to the eIF- 2 complex, it binds methionyl-tRNAi to 40 S subunits in a codon- dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40 S subunits in a GTP-dependent manner. May act by impiging the expression of specific proteins (581 aa)
     
 
  0.726
RBR1
Retinoblastoma-related protein 1 (1018 aa)
       
 
  0.723
Solyc04g050520.2.1
annotation not available (1340 aa)
     
 
  0.705
Solyc04g050510.2.1
annotation not available (1314 aa)
     
 
  0.705
101255925
Alba DNA/RNA-binding protein (165 aa)
       
      0.702
101261101
annotation not available (409 aa)
     
 
  0.666
101263723
Uncharacterized protein; methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; Belongs to the class-I aminoacyl-tRNA synthetase family (812 aa)
   
 
  0.666
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (8%) [HD]