STRINGSTRING
Solyc11g045120.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g045120.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g045120.1.1Uncharacterized protein (610 aa)    
Predicted Functional Partners:
Solyc02g078640.2.1
Uncharacterized protein (2023 aa)
     
      0.732
Solyc05g054500.1.1
Uncharacterized protein (399 aa)
     
      0.720
Solyc08g082960.2.1
Uncharacterized protein (409 aa)
       
      0.720
Solyc03g119280.2.1
Uncharacterized protein (504 aa)
     
 
  0.614
Solyc01g102800.2.1
Uncharacterized protein (880 aa)
     
 
  0.614
Solyc03g025270.2.1
Uncharacterized protein (314 aa)
     
      0.612
Solyc12g044370.1.1
Uncharacterized protein (830 aa)
       
      0.607
Solyc10g079670.1.1
Uncharacterized protein (754 aa)
       
      0.607
Solyc03g120470.2.1
MIP (1264 aa)
       
      0.607
Solyc05g055350.2.1
Uncharacterized protein (361 aa)
       
      0.578
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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