STRINGSTRING
Solyc11g045390.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g045390.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g045390.1.1Uncharacterized protein (59 aa)    
Predicted Functional Partners:
Solyc11g007690.1.1
Pyruvate kinase (490 aa)
       
  0.933
Solyc10g083720.1.1
Pyruvate kinase (527 aa)
       
  0.933
Solyc09g082970.2.1
Pyruvate kinase (593 aa)
       
  0.933
Solyc09g008840.2.1
Pyruvate kinase (527 aa)
       
  0.933
Solyc08g077180.2.1
Pyruvate kinase (580 aa)
       
  0.933
Solyc06g051930.2.1
Uncharacterized protein (756 aa)
       
  0.933
Solyc04g008740.2.1
Pyruvate kinase (510 aa)
       
  0.933
Solyc03g007810.2.1
Pyruvate kinase (578 aa)
       
  0.933
Solyc01g106780.2.1
Pyruvate kinase (575 aa)
       
  0.933
Solyc01g049650.2.1
Pyruvate kinase (502 aa)
       
  0.933
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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