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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g050710.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g050710.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g050710.1.1annotation not available (770 aa)    
Predicted Functional Partners:
101261809
Uncharacterized protein; SEC6 (749 aa)
     
 
  0.954
Solyc12g096290.1.1
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (765 aa)
     
 
  0.924
Solyc12g056520.1.1
annotation not available (977 aa)
     
 
  0.919
101266933
annotation not available (1106 aa)
     
 
  0.919
101268139
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (804 aa)
     
 
  0.913
101266009
Uncharacterized protein; Exocyst complex component 84B (772 aa)
     
 
  0.905
Solyc02g069080.2.1
BEST Arabidopsis thaliana protein match is- exocyst complex component 84B (TAIR-AT5G49830.1); Has 132 Blast hits to 132 proteins in 25 species- Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 8 (source /.../ BLink) (774 aa)
     
 
  0.852
101264715
Uncharacterized protein; Vps51/Vps67 family (components of vesicular transport) protein (756 aa)
     
 
  0.852
Solyc09g072720.1.1
annotation not available (756 aa)
     
 
  0.852
cdc5
CDC5-like protein (987 aa)
     
      0.848
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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