• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g056380.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g056380.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g056380.1.1annotation not available (153 aa)    
Predicted Functional Partners:
101261454
annotation not available (1124 aa)
     
 
  0.985
101261093
Sec23/sec24 transport family protein (742 aa)
     
 
  0.982
101253501
annotation not available (1069 aa)
     
 
  0.969
Solyc05g055690.1.1
annotation not available (1091 aa)
     
 
  0.969
Solyc02g082220.2.1
Sec23/Sec24 protein transport family protein (1030 aa)
     
 
  0.963
101259292
annotation not available (475 aa)
     
   
  0.856
101245021
annotation not available (475 aa)
     
   
  0.856
101245405
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (434 aa)
     
   
  0.847
101257847
annotation not available (301 aa)
     
 
  0.831
101265789
annotation not available (302 aa)
     
 
  0.831
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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