STRINGSTRING
Solyc11g056670.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g056670.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g056670.1.1Uncharacterized protein (477 aa)    
Predicted Functional Partners:
Solyc08g080390.2.1
Uncharacterized protein (481 aa)
   
     
  0.644
Solyc04g077440.2.1
Uncharacterized protein (525 aa)
     
 
  0.596
bc2.1
Squalene epoxidase 3-like (EC-1.14.13.132) (463 aa)
     
 
  0.596
Solyc11g068430.1.1
Putative ferredoxin (124 aa)
     
  0.570
Solyc11g065640.1.1
Uncharacterized protein (216 aa)
     
  0.570
Solyc11g006910.1.1
Uncharacterized protein (125 aa)
     
  0.570
Solyc10g075160.1.1
Ferredoxin II (144 aa)
     
  0.570
SEND33
Ferredoxin-1, chloroplastic ; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (144 aa)
     
  0.570
Solyc08g083360.2.1
Uncharacterized protein (192 aa)
     
  0.570
Solyc08g077050.2.1
Uncharacterized protein (191 aa)
     
  0.570
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (13%) [HD]