• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g056680.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g056680.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g056680.1.1annotation not available (364 aa)    
Predicted Functional Partners:
Solyc03g119010.2.1
Uncharacterized protein; Modifier of snc1,4 (240 aa)
       
      0.857
101251307
annotation not available (174 aa)
           
  0.594
Solyc08g067040.2.1
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (764 aa)
       
 
  0.561
101260254
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P; Belongs to the phosphohexose mutase family (558 aa)
           
  0.502
101268721
DNA-damage-repair/toleration protein (DRT102) (312 aa)
           
  0.502
101262737
annotation not available (371 aa)
     
   
  0.492
101245408
Uncharacterized protein; Pentatricopeptide (PPR) repeat-containing protein (882 aa)
           
  0.487
Solyc07g062940.2.1
annotation not available (716 aa)
     
 
  0.459
101265141
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- response to oxidative stress; EXPRESSED IN- root, cultured cell; Has 36 Blast hits to 36 proteins in 8 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Vi /.../- 0; Other Eukaryotes - 0 (source- NCBI BLink) (103 aa)
           
  0.457
CALM1
Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases (149 aa)
       
 
  0.454
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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