STRINGSTRING
Solyc11g063470.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g063470.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g063470.1.1Uncharacterized protein (54 aa)    
Predicted Functional Partners:
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
         
  0.658
Solyc04g072390.2.1
Uncharacterized protein (353 aa)
   
   
  0.591
Solyc00g026870.1.1
Annotation not available (465 aa)
   
   
  0.590
Solyc08g066180.2.1
Uncharacterized protein (587 aa)
   
   
  0.558
Solyc03g098140.2.1
Uncharacterized protein (343 aa)
   
 
  0.558
Solyc04g080770.2.1
Uncharacterized protein (547 aa)
   
   
  0.535
Solyc02g092010.2.1
Uncharacterized protein (613 aa)
   
   
  0.535
Solyc00g021520.1.1
Annotation not available (569 aa)
   
   
  0.535
Solyc03g113780.2.1
Uncharacterized protein (529 aa)
         
  0.527
Solyc03g113770.2.1
Uncharacterized protein (471 aa)
         
  0.527
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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