Solyc11g064900.1.1 protein (Solanum lycopersicum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

Solyc11g064900.1.1

Uncharacterized protein (529 aa)

Predicted Functional Partners:

Solyc04g006930.2.1

0.826

Solyc07g042460.1.1

0.800

Solyc02g091480.1.1

0.756

Solyc09g092020.2.1

0.756

Solyc06g069740.1.1

0.756

Solyc04g018110.1.1

0.756

Solyc03g115930.1.1

0.756

Solyc02g088090.1.1

0.756

Solyc02g067220.2.1

0.756

Solyc02g063340.1.1

0.756

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Solyc02g063340.1.1	Solyc11g064900.1.1	Uncharacterized protein	Uncharacterized protein	0.756
Solyc02g067220.2.1	Solyc11g064900.1.1	Uncharacterized protein	Uncharacterized protein	0.756
Solyc02g088090.1.1	Solyc11g064900.1.1	Uncharacterized protein	Uncharacterized protein	0.756
Solyc02g091480.1.1	Solyc11g064900.1.1	Uncharacterized protein	Uncharacterized protein	0.756
Solyc03g115930.1.1	Solyc11g064900.1.1	Uncharacterized protein	Uncharacterized protein	0.756
Solyc04g006930.2.1	Solyc11g064900.1.1	Uncharacterized protein	Uncharacterized protein	0.826
Solyc04g018110.1.1	Solyc11g064900.1.1	Hop-interacting protein THI026	Uncharacterized protein	0.756
Solyc06g069740.1.1	Solyc11g064900.1.1	Uncharacterized protein	Uncharacterized protein	0.756
Solyc07g042460.1.1	Solyc11g064900.1.1	Uncharacterized protein	Uncharacterized protein	0.800
Solyc09g092020.2.1	Solyc11g064900.1.1	Uncharacterized protein	Uncharacterized protein	0.756
Solyc11g064900.1.1	Solyc02g063340.1.1	Uncharacterized protein	Uncharacterized protein	0.756
Solyc11g064900.1.1	Solyc02g067220.2.1	Uncharacterized protein	Uncharacterized protein	0.756
Solyc11g064900.1.1	Solyc02g088090.1.1	Uncharacterized protein	Uncharacterized protein	0.756
Solyc11g064900.1.1	Solyc02g091480.1.1	Uncharacterized protein	Uncharacterized protein	0.756
Solyc11g064900.1.1	Solyc03g115930.1.1	Uncharacterized protein	Uncharacterized protein	0.756
Solyc11g064900.1.1	Solyc04g006930.2.1	Uncharacterized protein	Uncharacterized protein	0.826
Solyc11g064900.1.1	Solyc04g018110.1.1	Uncharacterized protein	Hop-interacting protein THI026	0.756
Solyc11g064900.1.1	Solyc06g069740.1.1	Uncharacterized protein	Uncharacterized protein	0.756
Solyc11g064900.1.1	Solyc07g042460.1.1	Uncharacterized protein	Uncharacterized protein	0.800
Solyc11g064900.1.1	Solyc09g092020.2.1	Uncharacterized protein	Uncharacterized protein	0.756

Network

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Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

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