• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g065160.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g065160.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g065160.1.1annotation not available (691 aa)    
Predicted Functional Partners:
Solyc03g059420.2.1
Sister chromatid cohesion protein; PHD finger family protein (1620 aa)
     
        0.822
Solyc03g059400.1.1
annotation not available (86 aa)
     
        0.822
Solyc04g049120.2.1
Uncharacterized protein; Duplicated homeodomain-like superfamily protein (1580 aa)
     
 
  0.780
101267413
annotation not available (1061 aa)
     
 
  0.706
Solyc02g085390.2.1
annotation not available (811 aa)
     
 
  0.706
101248358
annotation not available (771 aa)
     
 
  0.706
Solyc01g090650.1.1
SNF2 domain-containing protein / helicase domain-containing protein (613 aa)
     
 
  0.706
Solyc01g090640.2.1
annotation not available (206 aa)
     
 
  0.706
101245879
annotation not available (1065 aa)
     
 
  0.706
Solyc05g056530.2.1
DDT domain-containing protein (797 aa)
     
   
  0.625
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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