STRINGSTRING
Solyc11g065190.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g065190.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g065190.1.1Uncharacterized protein (181 aa)    
Predicted Functional Partners:
Solyc12g014320.1.1
Uncharacterized protein (551 aa)
     
  0.980
Solyc08g005420.2.1
Uncharacterized protein (448 aa)
     
  0.970
Solyc06g072830.2.1
Uncharacterized protein (455 aa)
     
  0.970
cdc20-1
Cell division control 20-1 (453 aa)
     
  0.970
Solyc05g007750.2.1
Uncharacterized protein (883 aa)
     
  0.966
Solyc08g067190.2.1
Uncharacterized protein (967 aa)
     
  0.965
Solyc01g102270.2.1
Uncharacterized protein (50 aa)
       
  0.961
Solyc02g079050.2.1
Uncharacterized protein (769 aa)
     
  0.954
Solyc03g113740.2.1
Uncharacterized protein (576 aa)
     
  0.954
Solyc02g062680.2.1
Anaphase-promoting complex subunit 10 ; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (191 aa)
     
  0.954
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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