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XET4 protein (Solanum lycopersicum) - STRING interaction network
"XET4" - Xyloglucan endotransglucosylase/hydrolase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XET4Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues; Belongs to the glycosyl hydrolase 16 family (293 aa)    
Predicted Functional Partners:
101256674
RING-type E3 ubiquitin transferase; Armadillo/beta-catenin-like repeat family protein (1046 aa)
           
  0.730
PMEU1
Pectinesterase/pectinesterase inhibitor U1; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the C-terminal section; belongs to the pectinesterase family (583 aa)
           
  0.730
TPG6
Polygalacturonase (395 aa)
           
  0.711
PGcat
Uncharacterized protein; Polygalacturonase (397 aa)
           
  0.711
PS-2
Dehiscence polygalacturonase (392 aa)
           
  0.711
XOPG1
Polygalacturonase (452 aa)
           
  0.624
Solyc08g081210.2.1
Protein kinase superfamily protein (840 aa)
           
  0.620
csn5
CSN5 protein (367 aa)
           
  0.549
101256005
annotation not available (367 aa)
           
  0.549
cel7
Endoglucanase; Endo-1,4-beta-D-glucanase (479 aa)
           
  0.539
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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