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STRINGSTRING
sir protein (Solanum lycopersicum) - STRING interaction network
"sir" - Sulfite reductase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sirSulfite reductase (691 aa)    
Predicted Functional Partners:
101252466
annotation not available (456 aa)
   
  0.996
101257319
annotation not available (456 aa)
   
  0.996
LOC544267
Adenylyl-sulfate reductase (461 aa)
   
  0.994
SO
Uncharacterized protein; Sulfite oxidase (393 aa)
   
 
  0.992
MST1
Sulfurtransferase (371 aa)
   
  0.986
101253940
annotation not available (351 aa)
   
 
  0.986
101255033
annotation not available (357 aa)
   
 
  0.982
Solyc01g097920.2.1
annotation not available (356 aa)
   
 
  0.981
101244415
annotation not available (325 aa)
   
 
  0.979
101254617
annotation not available (386 aa)
   
 
  0.978
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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