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LOC543971 protein (Solanum lycopersicum) - STRING interaction network
"LOC543971" - Osmotin-like protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543971Osmotin-like protein (252 aa)    
Predicted Functional Partners:
101257904
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues; Belongs to the glycosyl hydrolase 16 family (293 aa)
           
  0.763
101266699
Uncharacterized protein; Calcium-dependent phosphotriesterase superfamily protein (414 aa)
           
  0.669
101257903
annotation not available (411 aa)
       
 
  0.617
101250426
annotation not available (410 aa)
       
 
  0.617
101261707
annotation not available (451 aa)
       
 
  0.617
101254975
annotation not available (405 aa)
       
 
  0.617
101255948
annotation not available (413 aa)
       
 
  0.617
101249838
DEA(D/H)-box RNA helicase family protein (754 aa)
     
   
  0.571
101245966
RNA helicase; P-loop containing nucleoside triphosphate hydrolases superfamily protein (597 aa)
           
  0.570
101259209
annotation not available (594 aa)
           
  0.570
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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