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LOC543677 protein (Solanum lycopersicum) - STRING interaction network
"LOC543677" - Lethal leaf spot 1-like protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543677Lethal leaf spot 1-like protein (537 aa)    
Predicted Functional Partners:
rccr
Red chlorophyll catabolite reductase (314 aa)
     
  0.966
Solyc11g042640.1.1
Uncharacterized protein (276 aa)
 
  0.837
Solyc09g091100.2.1
Uncharacterized protein (459 aa)
   
 
 
  0.683
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
       
  0.644
Solyc01g088090.2.1
Uncharacterized protein (512 aa)
   
 
  0.619
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
         
    0.579
SGR1
Green flesh protein; Senescence-inducible chloroplast stay-green protein 1 (272 aa)
     
 
  0.522
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
         
    0.510
Glb1
Non-symbiotic hemoglobin class 1 (152 aa)
       
  0.488
Glb2
Non-symbiotic hemoglobin 2 ; May not function as an oxygen storage or transport protein, but might act as an oxygen sensor or play a role in electron transfer, possibly to a bound oxygen molecule (156 aa)
       
  0.488
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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